BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015H11SP1|AL426929
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 703 0.0
>3x_Contig1769
Length = 25795
Score = 703 bits (341), Expect = 0.0
Identities = 420/447 (93%), Gaps = 4/447 (0%)
Strand = Plus / Minus
Query: 540 ttaaacmtcagattgtccaatcycacamtcsgcttttccccccggctttyaaattccagt 599
|||||| ||||||||||||||| | | | | |||||| ||||||| ||||||||||
Sbjct: 13695 ttaaacatcagattgtccaatctaagaatgggattttccggacggcttttaaattccagt 13636
Query: 600 ccgtgatacamaaastacctcttctcttatgtcatcctctcttattgcgttgtctggctg 659
| |||||| | ||| ||||||||||||||||| || || | |||||| ||||||||||||
Sbjct: 13635 cggtgatagaaaaagtacctcttctcttatgtaatgctgtgttattg-gttgtctggctg 13577
Query: 660 cagcatattcacttcttttgacagatggaagaatgtctcctgcgcctctattcgtcgtgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13576 cagcatattcacttcttttgacagatggaagaatgtctcctgcgcctctattcgtcgtgg 13517
Query: 720 tcttggtgatattggaccgacttccacgaagagaggcatttaaaggtaatctaaagagtt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13516 tcttggtgatattggaccgacttccacgaagagaggcatttaaaggtaatctaaagagtt 13457
Query: 780 tcgatgttatcttttcacattagtggctaatgtagcatgaaaagcaatatctcaagcttc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13456 tcgatgttatcttttcacattagtggctaatgtagcatgaaaagcaatatctcaagcttc 13397
Query: 840 gaccttagtgtacg-amcttggtttgagaaaagcacctttttccattgagattagagaca 898
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13396 gaccttagtgtacgaaccttggtttgagaaaagcacctttttccattgagattagagaca 13337
Query: 899 aaa-catgtcatagggataatgacgactgccgttacttgcattctttcgggatgtatgaa 957
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 13336 aaaccatgtcatagggataatgacgactgccgttacttgcattctttcggtatgtatgaa 13277
Query: 958 a-cmtatcagttattgtacatggaaaa 983
| | |||||||||||||||||||||||
Sbjct: 13276 accatatcagttattgtacatggaaaa 13250
Score = 274 bits (133), Expect = 2e-73
Identities = 155/171 (90%)
Strand = Plus / Minus
Query: 1 agatttcgggaaaaaacataagctcatcatttagtatgtacctgccgaaggcatacgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14233 agatttcgggaaaaaacataagctcatcatttagtatgtacctgccgaaggcatacgtga 14174
Query: 61 tgacgggattggaatagtagttaccagttacaaactaatgggactsgsgcctsccctctc 120
||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||
Sbjct: 14173 tgacgggattggaatagtagttaccagttacaaactaatgggactggggcctgccctctc 14114
Query: 121 stactaaastcatcsamgaagtcgttttssctstctssscctacaccttct 171
||||||| | ||| | ||||||||||| || | | |||| |||||||
Sbjct: 14113 gtactaaagtgatcgaagaagtcgttttggctgtgtgggcctagaccttct 14063
Score = 120 bits (58), Expect = 7e-27
Identities = 154/196 (78%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 315 cattcatttcctttctccctcacattacctaatccaaammtmactttattssaactcctt 374
|||||||||||||| ||||| |||||| |||||||||| | |||||||| ||||||||
Sbjct: 13919 cattcatttcctttgtccctgacattagctaatccaaaaataactttattggaactcctt 13860
Query: 375 cttcacacccatatttcatstctcactataactccccacamcccctacactctaccmaat 434
||||||| |||||||| || ||||| ||||||| | || | | | || ||| || |||
Sbjct: 13859 cttcacagccatatttgatgtctcagtataactgcacagaacgcgtagacttta-gaaat 13801
Query: 435 acawtccmcmcstccacctcaatacssttctccatsamactttaaccctccccaacataa 494
||| | | | |||| |||||| |||||||| | ||||||| ||| | ||| ||||
Sbjct: 13800 acaatgcacaggtccaggtcaatagggttctccatgaaactttaagcctgcacaagataa 13741
Query: 495 ttccttcctagcmaga 510
|| ||||||||| |||
Sbjct: 13740 ttgcttcctagcaaga 13725
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3947
Number of Sequences: 1807
Number of extensions: 3947
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 49 (101.5 bits)